Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox9Q04887 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sox9Q04887 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox9Q04887 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Gm14277-201ENSMUST00000121195 360 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.04□□□□□ -0.16
Sox9Q04887 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox9Q04887 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox9Q04887 Morn2-202ENSMUST00000227729 656 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox9Q04887 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sox9Q04887 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.04□□□□□ -0.16
Sox9Q04887 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox9Q04887 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox9Q04887 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox9Q04887 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.03□□□□□ -0.16
Sox9Q04887 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Sox9Q04887 Gm14028-201ENSMUST00000117434 479 ntBASIC14.03□□□□□ -0.16
Sox9Q04887 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.03□□□□□ -0.16
Sox9Q04887 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox9Q04887 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Gm7809-201ENSMUST00000153199 742 ntBASIC14.03□□□□□ -0.16
Sox9Q04887 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.03□□□□□ -0.16
Sox9Q04887 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Sox9Q04887 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.03□□□□□ -0.16
Sox9Q04887 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.03□□□□□ -0.16
Sox9Q04887 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox9Q04887 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox9Q04887 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox9Q04887 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Sox9Q04887 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox9Q04887 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.03□□□□□ -0.16
Sox9Q04887 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox9Q04887 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Sox9Q04887 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
Sox9Q04887 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox9Q04887 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Sox9Q04887 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Sox9Q04887 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Sox9Q04887 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Gm11628-201ENSMUST00000117568 171 ntBASIC14.02□□□□□ -0.17
Sox9Q04887 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox9Q04887 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Gm38144-201ENSMUST00000192790 465 ntBASIC14.02□□□□□ -0.17
Sox9Q04887 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.02□□□□□ -0.17
Sox9Q04887 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox9Q04887 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox9Q04887 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sox9Q04887 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms