Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lig3P97386 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lig3P97386 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lig3P97386 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lig3P97386 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lig3P97386 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.94□□□□□ -0.02
Lig3P97386 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.93□□□□□ -0.02
Lig3P97386 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Lig3P97386 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Lig3P97386 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Lig3P97386 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.93□□□□□ -0.02
Lig3P97386 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Lig3P97386 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Lig3P97386 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.93□□□□□ -0.02
Lig3P97386 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.93□□□□□ -0.02
Lig3P97386 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Lig3P97386 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.93□□□□□ -0.02
Lig3P97386 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lig3P97386 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lig3P97386 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Lig3P97386 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lig3P97386 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lig3P97386 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.92□□□□□ -0.02
Lig3P97386 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Lig3P97386 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.92□□□□□ -0.02
Lig3P97386 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.92□□□□□ -0.02
Lig3P97386 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.92□□□□□ -0.02
Lig3P97386 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.92□□□□□ -0.02
Lig3P97386 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lig3P97386 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lig3P97386 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.92□□□□□ -0.02
Lig3P97386 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.92□□□□□ -0.02
Lig3P97386 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.91□□□□□ -0.02
Lig3P97386 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lig3P97386 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.91□□□□□ -0.02
Lig3P97386 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Lig3P97386 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.91□□□□□ -0.02
Lig3P97386 Mir1247-201ENSMUST00000116706 82 ntBASIC14.91□□□□□ -0.02
Lig3P97386 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Lig3P97386 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.91□□□□□ -0.02
Lig3P97386 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.91□□□□□ -0.02
Lig3P97386 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lig3P97386 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.91□□□□□ -0.02
Lig3P97386 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.91□□□□□ -0.02
Lig3P97386 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lig3P97386 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms