Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim43cP86449 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.83□□□□□ -0.04
Trim43cP86449 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Trim43cP86449 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.82□□□□□ -0.04
Trim43cP86449 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.82□□□□□ -0.04
Trim43cP86449 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Trim43cP86449 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim43cP86449 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim43cP86449 Gm11524-201ENSMUST00000119349 807 ntBASIC14.82□□□□□ -0.04
Trim43cP86449 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trim43cP86449 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trim43cP86449 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim43cP86449 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim43cP86449 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim43cP86449 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim43cP86449 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Trim43cP86449 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43cP86449 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim43cP86449 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim43cP86449 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim43cP86449 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim43cP86449 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Gm5354-201ENSMUST00000182417 973 ntBASIC14.81□□□□□ -0.04
Trim43cP86449 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim43cP86449 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim43cP86449 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.81□□□□□ -0.04
Trim43cP86449 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43cP86449 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43cP86449 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim43cP86449 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43cP86449 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43cP86449 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.8□□□□□ -0.04
Trim43cP86449 Gm7488-201ENSMUST00000117148 684 ntBASIC14.8□□□□□ -0.04
Trim43cP86449 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43cP86449 Gm10576-201ENSMUST00000191927 825 ntBASIC14.8□□□□□ -0.04
Trim43cP86449 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.8□□□□□ -0.04
Trim43cP86449 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim43cP86449 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trim43cP86449 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43cP86449 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms