Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gbx1P82976 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gbx1P82976 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.84□□□□□ -0.35
Gbx1P82976 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gbx1P82976 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gbx1P82976 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Gbx1P82976 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gbx1P82976 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gbx1P82976 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Gbx1P82976 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gbx1P82976 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gbx1P82976 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.83□□□□□ -0.36
Gbx1P82976 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.83□□□□□ -0.36
Gbx1P82976 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.83□□□□□ -0.36
Gbx1P82976 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.83□□□□□ -0.36
Gbx1P82976 Gm6736-201ENSMUST00000166583 948 ntBASIC12.83□□□□□ -0.36
Gbx1P82976 Gm27618-201ENSMUST00000183671 60 ntBASIC12.83□□□□□ -0.36
Gbx1P82976 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.83□□□□□ -0.36
Gbx1P82976 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Gbx1P82976 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gbx1P82976 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gbx1P82976 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gbx1P82976 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gbx1P82976 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gbx1P82976 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.82□□□□□ -0.36
Gbx1P82976 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Gbx1P82976 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Gm43703-201ENSMUST00000200523 763 ntBASIC12.82□□□□□ -0.36
Gbx1P82976 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.82□□□□□ -0.36
Gbx1P82976 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Gbx1P82976 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Gbx1P82976 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gbx1P82976 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gbx1P82976 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gbx1P82976 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gbx1P82976 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Gbx1P82976 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Gbx1P82976 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gbx1P82976 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gbx1P82976 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gbx1P82976 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gbx1P82976 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gbx1P82976 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.81□□□□□ -0.36
Gbx1P82976 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gbx1P82976 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gbx1P82976 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.81□□□□□ -0.36
Gbx1P82976 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gbx1P82976 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.81□□□□□ -0.36
Gbx1P82976 Gm13385-201ENSMUST00000121089 220 ntBASIC12.81□□□□□ -0.36
Gbx1P82976 Gm26308-201ENSMUST00000157768 69 ntBASIC12.81□□□□□ -0.36
Gbx1P82976 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.81□□□□□ -0.36
Gbx1P82976 Gm8927-201ENSMUST00000181978 981 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms