Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Msh6P54276 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Msh6P54276 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Msh6P54276 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.15■□□□□ 0.34
Msh6P54276 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.15■□□□□ 0.34
Msh6P54276 Gm9368-201ENSMUST00000219348 831 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Msh6P54276 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.15■□□□□ 0.34
Msh6P54276 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Msh6P54276 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Msh6P54276 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.15■□□□□ 0.34
Msh6P54276 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Gm29396-201ENSMUST00000185659 716 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Msh6P54276 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.15■□□□□ 0.34
Msh6P54276 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.15■□□□□ 0.34
Msh6P54276 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh6P54276 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Msh6P54276 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Msh6P54276 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Msh6P54276 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Msh6P54276 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Msh6P54276 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Msh6P54276 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.14■□□□□ 0.33
Msh6P54276 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Msh6P54276 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.14■□□□□ 0.33
Msh6P54276 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Msh6P54276 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.14■□□□□ 0.33
Msh6P54276 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.14■□□□□ 0.33
Msh6P54276 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Msh6P54276 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Msh6P54276 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Msh6P54276 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.14■□□□□ 0.33
Msh6P54276 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.14■□□□□ 0.33
Msh6P54276 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.14■□□□□ 0.33
Msh6P54276 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.14■□□□□ 0.33
Msh6P54276 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh6P54276 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.13■□□□□ 0.33
Msh6P54276 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.13■□□□□ 0.33
Msh6P54276 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Msh6P54276 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Msh6P54276 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms