Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.32■□□□□ 0.04
Atoh1P48985 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.32■□□□□ 0.04
Atoh1P48985 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Atoh1P48985 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atoh1P48985 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atoh1P48985 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atoh1P48985 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atoh1P48985 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atoh1P48985 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atoh1P48985 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.32■□□□□ 0.04
Atoh1P48985 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.32■□□□□ 0.04
Atoh1P48985 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atoh1P48985 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atoh1P48985 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atoh1P48985 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Gm6447-201ENSMUST00000118905 835 ntBASIC15.31■□□□□ 0.04
Atoh1P48985 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.31■□□□□ 0.04
Atoh1P48985 Gm22902-201ENSMUST00000158488 302 ntBASIC15.31■□□□□ 0.04
Atoh1P48985 Gm24548-201ENSMUST00000158650 108 ntBASIC15.31■□□□□ 0.04
Atoh1P48985 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.31■□□□□ 0.04
Atoh1P48985 Gm27341-201ENSMUST00000183570 106 ntBASIC15.31■□□□□ 0.04
Atoh1P48985 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.31■□□□□ 0.04
Atoh1P48985 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Atoh1P48985 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.31■□□□□ 0.04
Atoh1P48985 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atoh1P48985 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atoh1P48985 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Atoh1P48985 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atoh1P48985 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Gm24830-201ENSMUST00000102024 166 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.3■□□□□ 0.04
Atoh1P48985 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.3■□□□□ 0.04
Atoh1P48985 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Gm24990-201ENSMUST00000157406 323 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Atoh1P48985 Gm25890-201ENSMUST00000177643 165 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Gm22614-201ENSMUST00000178300 165 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Atoh1P48985 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.3■□□□□ 0.04
Atoh1P48985 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Gm22042-201ENSMUST00000082989 165 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Gm26232-201ENSMUST00000083360 166 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Gm24136-201ENSMUST00000083374 165 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Gm26110-201ENSMUST00000083971 165 ntBASIC15.3■□□□□ 0.04
Atoh1P48985 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Atoh1P48985 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atoh1P48985 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.29■□□□□ 0.04
Atoh1P48985 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atoh1P48985 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.29■□□□□ 0.04
Atoh1P48985 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atoh1P48985 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atoh1P48985 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atoh1P48985 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atoh1P48985 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Atoh1P48985 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms