Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm27375-201ENSMUST00000183799 107 ntBASIC12.9□□□□□ -0.34
Nkx2-6P43688 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.9□□□□□ -0.34
Nkx2-6P43688 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Nkx2-6P43688 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-6P43688 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx2-6P43688 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx2-6P43688 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.89□□□□□ -0.35
Nkx2-6P43688 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Gm14660-201ENSMUST00000119809 575 ntBASIC12.89□□□□□ -0.35
Nkx2-6P43688 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Gm29649-201ENSMUST00000185649 419 ntBASIC12.89□□□□□ -0.35
Nkx2-6P43688 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-6P43688 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.88□□□□□ -0.35
Nkx2-6P43688 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.88□□□□□ -0.35
Nkx2-6P43688 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.88□□□□□ -0.35
Nkx2-6P43688 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-6P43688 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-6P43688 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms