Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.98□□□□□ -0.49
Upk2P38575 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Upk2P38575 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk2P38575 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.97□□□□□ -0.49
Upk2P38575 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Upk2P38575 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk2P38575 Gm12151-201ENSMUST00000121374 290 ntBASIC11.97□□□□□ -0.49
Upk2P38575 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk2P38575 Gm21854-201ENSMUST00000179901 471 ntBASIC11.97□□□□□ -0.49
Upk2P38575 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk2P38575 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.97□□□□□ -0.49
Upk2P38575 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Gm20445-201ENSMUST00000061905 565 ntBASIC11.97□□□□□ -0.49
Upk2P38575 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Upk2P38575 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk2P38575 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.97□□□□□ -0.49
Upk2P38575 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk2P38575 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk2P38575 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk2P38575 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Upk2P38575 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.96□□□□□ -0.49
Upk2P38575 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.96□□□□□ -0.49
Upk2P38575 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Upk2P38575 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Upk2P38575 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.96□□□□□ -0.49
Upk2P38575 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Upk2P38575 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Upk2P38575 Gm29667-201ENSMUST00000190817 490 ntBASIC11.96□□□□□ -0.49
Upk2P38575 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.96□□□□□ -0.49
Upk2P38575 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.96□□□□□ -0.49
Upk2P38575 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk2P38575 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Upk2P38575 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.96□□□□□ -0.5
Upk2P38575 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk2P38575 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk2P38575 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk2P38575 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk2P38575 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk2P38575 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk2P38575 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Upk2P38575 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk2P38575 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Upk2P38575 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk2P38575 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms