Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Foxa1P35582 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Gm43094-201ENSMUST00000196549 921 ntBASIC12.62□□□□□ -0.39
Foxa1P35582 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.62□□□□□ -0.39
Foxa1P35582 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Foxa1P35582 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Foxa1P35582 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Foxa1P35582 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Foxa1P35582 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxa1P35582 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Foxa1P35582 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Foxa1P35582 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Gm12859-201ENSMUST00000117834 427 ntBASIC12.61□□□□□ -0.39
Foxa1P35582 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Foxa1P35582 Gm5354-201ENSMUST00000182417 973 ntBASIC12.61□□□□□ -0.39
Foxa1P35582 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.61□□□□□ -0.39
Foxa1P35582 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Foxa1P35582 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Foxa1P35582 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.61□□□□□ -0.39
Foxa1P35582 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Foxa1P35582 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Foxa1P35582 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Foxa1P35582 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.61□□□□□ -0.39
Foxa1P35582 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxa1P35582 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxa1P35582 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Foxa1P35582 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Foxa1P35582 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxa1P35582 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxa1P35582 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Foxa1P35582 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Foxa1P35582 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Foxa1P35582 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Foxa1P35582 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Foxa1P35582 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Foxa1P35582 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.6□□□□□ -0.39
Foxa1P35582 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Gm28631-201ENSMUST00000190740 334 ntBASIC12.6□□□□□ -0.39
Foxa1P35582 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms