Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TpbpaP13438 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TpbpaP13438 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TpbpaP13438 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TpbpaP13438 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TpbpaP13438 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.37□□□□□ -0.43
TpbpaP13438 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TpbpaP13438 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TpbpaP13438 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.37□□□□□ -0.43
TpbpaP13438 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.37□□□□□ -0.43
TpbpaP13438 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TpbpaP13438 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TpbpaP13438 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.36□□□□□ -0.43
TpbpaP13438 Gm13823-201ENSMUST00000119930 345 ntBASIC12.36□□□□□ -0.43
TpbpaP13438 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TpbpaP13438 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 AA619741-201ENSMUST00000195095 646 ntBASIC12.36□□□□□ -0.43
TpbpaP13438 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.36□□□□□ -0.43
TpbpaP13438 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TpbpaP13438 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.36□□□□□ -0.43
TpbpaP13438 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TpbpaP13438 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TpbpaP13438 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.36□□□□□ -0.43
TpbpaP13438 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.36□□□□□ -0.43
TpbpaP13438 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.35□□□□□ -0.43
TpbpaP13438 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TpbpaP13438 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 Gm15467-201ENSMUST00000120582 445 ntBASIC12.35□□□□□ -0.43
TpbpaP13438 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.35□□□□□ -0.43
TpbpaP13438 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.35□□□□□ -0.43
TpbpaP13438 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.35□□□□□ -0.43
TpbpaP13438 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.35□□□□□ -0.43
TpbpaP13438 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TpbpaP13438 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TpbpaP13438 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TpbpaP13438 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TpbpaP13438 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TpbpaP13438 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms