Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.07■□□□□ 0
Hoxc6P10629 Gm26083-201ENSMUST00000157904 193 ntBASIC15.07■□□□□ 0
Hoxc6P10629 Gm16570-201ENSMUST00000161951 436 ntBASIC15.07■□□□□ 0
Hoxc6P10629 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.07■□□□□ 0
Hoxc6P10629 Gm37466-201ENSMUST00000195692 652 ntBASIC15.07■□□□□ 0
Hoxc6P10629 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Gm8227-201ENSMUST00000223306 571 ntBASIC15.07■□□□□ 0
Hoxc6P10629 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.07■□□□□ 0
Hoxc6P10629 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.07■□□□□ 0
Hoxc6P10629 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxc6P10629 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
Hoxc6P10629 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc6P10629 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hoxc6P10629 Mir877-201ENSMUST00000104738 85 ntBASIC15.06■□□□□ 0
Hoxc6P10629 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.06■□□□□ 0
Hoxc6P10629 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.06■□□□□ 0
Hoxc6P10629 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Hoxc6P10629 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Hoxc6P10629 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.06■□□□□ 0
Hoxc6P10629 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.06■□□□□ 0
Hoxc6P10629 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc6P10629 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.06■□□□□ 0
Hoxc6P10629 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc6P10629 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.06■□□□□ 0
Hoxc6P10629 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.06■□□□□ 0
Hoxc6P10629 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.06■□□□□ 0
Hoxc6P10629 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc6P10629 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc6P10629 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.05■□□□□ 0
Hoxc6P10629 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc6P10629 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.05■□□□□ 0
Hoxc6P10629 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc6P10629 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc6P10629 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Hoxc6P10629 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc6P10629 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc6P10629 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Hoxc6P10629 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Hoxc6P10629 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Gm26461-201ENSMUST00000175064 290 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Gm38158-201ENSMUST00000194617 339 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Hoxc6P10629 Gm6334-201ENSMUST00000207083 228 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.05■□□□□ -0
Hoxc6P10629 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hoxc6P10629 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.05■□□□□ -0
Hoxc6P10629 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Hoxc6P10629 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc6P10629 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Hoxc6P10629 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.04■□□□□ -0
Hoxc6P10629 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc6P10629 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc6P10629 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hoxc6P10629 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc6P10629 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc6P10629 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms