Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc8P09025 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.4□□□□□ -0.1
Hoxc8P09025 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.4□□□□□ -0.1
Hoxc8P09025 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc8P09025 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc8P09025 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc8P09025 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc8P09025 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc8P09025 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc8P09025 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hoxc8P09025 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc8P09025 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hoxc8P09025 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Gm21769-201ENSMUST00000211922 111 ntBASIC14.39□□□□□ -0.11
Hoxc8P09025 Gm32025-201ENSMUST00000217960 307 ntBASIC14.39□□□□□ -0.11
Hoxc8P09025 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc8P09025 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.39□□□□□ -0.11
Hoxc8P09025 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc8P09025 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc8P09025 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc8P09025 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc8P09025 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc8P09025 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxc8P09025 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxc8P09025 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.38□□□□□ -0.11
Hoxc8P09025 Mospd4-201ENSMUST00000180618 576 ntBASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm18056-201ENSMUST00000207670 568 ntBASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm18061-201ENSMUST00000208350 562 ntBASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm18063-201ENSMUST00000208529 568 ntBASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm18052-201ENSMUST00000208750 559 ntBASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Hoxc8P09025 Gm5781-201ENSMUST00000219792 443 ntBASIC14.38□□□□□ -0.11
Hoxc8P09025 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc8P09025 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.37□□□□□ -0.11
Hoxc8P09025 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm15370-201ENSMUST00000117158 253 ntBASIC14.37□□□□□ -0.11
Hoxc8P09025 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm4986-201ENSMUST00000119731 549 ntBASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm26083-201ENSMUST00000157904 193 ntBASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm2991-201ENSMUST00000173338 480 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms