Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.11□□□□□ -0.63
P04212 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.11□□□□□ -0.63
P04212 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.11□□□□□ -0.63
P04212 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P04212 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.11□□□□□ -0.63
P04212 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.11□□□□□ -0.63
P04212 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.11□□□□□ -0.63
P04212 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04212 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04212 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.1□□□□□ -0.63
P04212 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P04212 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04212 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P04212 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
P04212 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.1□□□□□ -0.63
P04212 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.1□□□□□ -0.63
P04212 Gm10253-201ENSMUST00000194270 940 ntBASIC11.1□□□□□ -0.63
P04212 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.1□□□□□ -0.63
P04212 Gm16476-201ENSMUST00000221544 139 ntBASIC11.1□□□□□ -0.63
P04212 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.1□□□□□ -0.63
P04212 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
P04212 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.1□□□□□ -0.63
P04212 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04212 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04212 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04212 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.09□□□□□ -0.63
P04212 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
P04212 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.09□□□□□ -0.63
P04212 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.09□□□□□ -0.63
P04212 Gm6916-202ENSMUST00000205523 195 ntBASIC11.09□□□□□ -0.63
P04212 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P04212 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P04212 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04212 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.09□□□□□ -0.63
P04212 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04212 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms