Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Vti1aO89116 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vti1aO89116 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.72□□□□□ -0.05
Vti1aO89116 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.72□□□□□ -0.05
Vti1aO89116 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vti1aO89116 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vti1aO89116 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Vti1aO89116 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vti1aO89116 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.71□□□□□ -0.05
Vti1aO89116 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Gm8927-201ENSMUST00000181978 981 ntBASIC14.71□□□□□ -0.05
Vti1aO89116 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.71□□□□□ -0.05
Vti1aO89116 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.71□□□□□ -0.05
Vti1aO89116 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vti1aO89116 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Vti1aO89116 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.71□□□□□ -0.05
Vti1aO89116 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Gm3222-201ENSMUST00000071282 990 ntBASIC14.71□□□□□ -0.05
Vti1aO89116 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.71□□□□□ -0.05
Vti1aO89116 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1aO89116 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.71□□□□□ -0.06
Vti1aO89116 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1aO89116 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Vti1aO89116 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1aO89116 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1aO89116 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1aO89116 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1aO89116 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vti1aO89116 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Vti1aO89116 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.7□□□□□ -0.06
Vti1aO89116 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vti1aO89116 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.7□□□□□ -0.06
Vti1aO89116 Gm15429-201ENSMUST00000151268 798 ntBASIC14.7□□□□□ -0.06
Vti1aO89116 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.7□□□□□ -0.06
Vti1aO89116 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.7□□□□□ -0.06
Vti1aO89116 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.7□□□□□ -0.06
Vti1aO89116 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.7□□□□□ -0.06
Vti1aO89116 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.7□□□□□ -0.06
Vti1aO89116 Gm6007-201ENSMUST00000208170 823 ntBASIC14.7□□□□□ -0.06
Vti1aO89116 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.7□□□□□ -0.06
Vti1aO89116 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1aO89116 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Vti1aO89116 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vti1aO89116 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Vti1aO89116 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms