Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.01□□□□□ -0.17
Syn1O88935 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.01□□□□□ -0.17
Syn1O88935 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Mir497b-201ENSMUST00000093601 125 ntBASIC14.01□□□□□ -0.17
Syn1O88935 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14□□□□□ -0.17
Syn1O88935 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14□□□□□ -0.17
Syn1O88935 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Syn1O88935 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Syn1O88935 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14□□□□□ -0.17
Syn1O88935 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14□□□□□ -0.17
Syn1O88935 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14□□□□□ -0.17
Syn1O88935 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14□□□□□ -0.17
Syn1O88935 Gm19208-201ENSMUST00000213861 912 ntBASIC14□□□□□ -0.17
Syn1O88935 AC154595.3-201ENSMUST00000224579 384 ntBASIC14□□□□□ -0.17
Syn1O88935 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14□□□□□ -0.17
Syn1O88935 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14□□□□□ -0.17
Syn1O88935 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14□□□□□ -0.17
Syn1O88935 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Syn1O88935 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syn1O88935 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Syn1O88935 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.99□□□□□ -0.17
Syn1O88935 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.99□□□□□ -0.17
Syn1O88935 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.99□□□□□ -0.17
Syn1O88935 Mospd4-201ENSMUST00000180618 576 ntBASIC13.99□□□□□ -0.17
Syn1O88935 Gm2260-201ENSMUST00000184965 657 ntBASIC13.99□□□□□ -0.17
Syn1O88935 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.99□□□□□ -0.17
Syn1O88935 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.99□□□□□ -0.17
Syn1O88935 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.99□□□□□ -0.17
Syn1O88935 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.99□□□□□ -0.17
Syn1O88935 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Syn1O88935 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Syn1O88935 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Syn1O88935 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Syn1O88935 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syn1O88935 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Syn1O88935 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.98□□□□□ -0.17
Syn1O88935 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.98□□□□□ -0.17
Syn1O88935 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.98□□□□□ -0.17
Syn1O88935 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Syn1O88935 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Gm4909-201ENSMUST00000118749 794 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms