Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.97■□□□□ 0.31
Cfdp1O88271 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.97■□□□□ 0.31
Cfdp1O88271 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.97■□□□□ 0.31
Cfdp1O88271 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cfdp1O88271 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cfdp1O88271 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.96■□□□□ 0.31
Cfdp1O88271 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Gm44397-201ENSMUST00000195950 113 ntBASIC16.96■□□□□ 0.31
Cfdp1O88271 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.96■□□□□ 0.31
Cfdp1O88271 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.96■□□□□ 0.31
Cfdp1O88271 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cfdp1O88271 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cfdp1O88271 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cfdp1O88271 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cfdp1O88271 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cfdp1O88271 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cfdp1O88271 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Cfdp1O88271 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.96■□□□□ 0.3
Cfdp1O88271 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.96■□□□□ 0.3
Cfdp1O88271 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cfdp1O88271 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.95■□□□□ 0.3
Cfdp1O88271 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm12403-201ENSMUST00000121384 959 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cfdp1O88271 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.95■□□□□ 0.3
Cfdp1O88271 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cfdp1O88271 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cfdp1O88271 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms