Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Gm32025-201ENSMUST00000217960 307 ntBASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Tubgcp6G5E8P0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Gm9004-201ENSMUST00000218739 1222 ntBASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Gm19163-201ENSMUST00000223313 780 ntBASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Gm13813-201ENSMUST00000120998 787 ntBASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Gm44262-201ENSMUST00000204969 372 ntBASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tubgcp6G5E8P0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp6G5E8P0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Gm28386-201ENSMUST00000189147 1849 ntBASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Tubgcp6G5E8P0 Gm38049-201ENSMUST00000195698 1372 ntBASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Gm19221-201ENSMUST00000221827 1477 ntBASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp6G5E8P0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC18.52■□□□□ 0.55
Tubgcp6G5E8P0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Tubgcp6G5E8P0 Gm6407-201ENSMUST00000176468 549 ntBASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms