Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Gm15547-201ENSMUST00000122152 333 ntBASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Gm2546-201ENSMUST00000182630 991 ntBASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Carlr-201ENSMUST00000181515 2574 ntBASIC16.66■□□□□ 0.26
Ccdc85cE9Q6B2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm11667-201ENSMUST00000119828 486 ntBASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm27552-201ENSMUST00000183351 62 ntBASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm27844-201ENSMUST00000183613 62 ntBASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc85cE9Q6B2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Gm13047-201ENSMUST00000117116 815 ntBASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Gm14109-201ENSMUST00000118814 309 ntBASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc85cE9Q6B2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc85cE9Q6B2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms