Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm2991-201ENSMUST00000173338 480 ntBASIC12.22□□□□□ -0.45
Shank1D3YZU1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm6621-201ENSMUST00000193251 772 ntBASIC12.22□□□□□ -0.45
Shank1D3YZU1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Mir877-201ENSMUST00000104738 85 ntBASIC12.21□□□□□ -0.45
Shank1D3YZU1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Gm18753-201ENSMUST00000201000 566 ntBASIC12.21□□□□□ -0.45
Shank1D3YZU1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shank1D3YZU1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shank1D3YZU1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shank1D3YZU1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Gm29608-201ENSMUST00000190444 463 ntBASIC12.2□□□□□ -0.46
Shank1D3YZU1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shank1D3YZU1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms