Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm2445-201ENSMUST00000182798 989 ntBASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 AA619741-201ENSMUST00000195095 646 ntBASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm2756-201ENSMUST00000195851 400 ntBASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1aQ9QWF0 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1aQ9QWF0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms