Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm2383-201ENSMUST00000181461 807 ntBASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1fQ9JIS7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1fQ9JIS7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Mir877-201ENSMUST00000104738 85 ntBASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Gm26461-201ENSMUST00000175064 290 ntBASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.27■□□□□ 0.03
Cacna1fQ9JIS7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gm25214-201ENSMUST00000104573 129 ntBASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gm10608-202ENSMUST00000213924 676 ntBASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1fQ9JIS7 Gm13665-201ENSMUST00000120830 528 ntBASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Gm12291-201ENSMUST00000121627 311 ntBASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms