Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Ssr1-203ENSMUST00000225246 1825 ntBASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp5Q9D7S9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Gm11779-201ENSMUST00000118541 368 ntBASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Gm18889-201ENSMUST00000174284 929 ntBASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp5Q9D7S9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Mir698-201ENSMUST00000102164 109 ntBASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Gm5566-201ENSMUST00000116118 459 ntBASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Gm18766-201ENSMUST00000189811 808 ntBASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp5Q9D7S9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm15467-201ENSMUST00000120582 445 ntBASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm9719-201ENSMUST00000162765 543 ntBASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm29541-201ENSMUST00000191351 678 ntBASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms