Protein–RNA interactions for Protein: Q9CZG9

Pdzd11, PDZ domain-containing protein 11, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd11Q9CZG9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Rprl3-201ENSMUST00000157400 290 ntBASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdzd11Q9CZG9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdzd11Q9CZG9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdzd11Q9CZG9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms