Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldnd1Q9CQX5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Cldnd1Q9CQX5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cldnd1Q9CQX5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cldnd1Q9CQX5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Gm16202-201ENSMUST00000117532 544 ntBASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Gm11964-201ENSMUST00000120982 444 ntBASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Morn2-202ENSMUST00000227729 656 ntBASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cldnd1Q9CQX5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms