Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Q9CQC3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Q9CQC3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.17□□□□□ -0.14
Q9CQC3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Q9CQC3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.17□□□□□ -0.14
Q9CQC3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Q9CQC3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.17□□□□□ -0.14
Q9CQC3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Q9CQC3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Q9CQC3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Q9CQC3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Q9CQC3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Q9CQC3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Gm16215-201ENSMUST00000161990 637 ntBASIC14.16□□□□□ -0.14
Q9CQC3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Q9CQC3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.16□□□□□ -0.14
Q9CQC3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Q9CQC3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q9CQC3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.15□□□□□ -0.14
Q9CQC3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Q9CQC3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Q9CQC3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Acot6-202ENSMUST00000222921 3622 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Q9CQC3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.15□□□□□ -0.14
Q9CQC3 Gm26464-201ENSMUST00000157094 305 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.15□□□□□ -0.14
Q9CQC3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Q9CQC3 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.15□□□□□ -0.14
Q9CQC3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Q9CQC3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q9CQC3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms