Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col25a1Q99MQ5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm11675-201ENSMUST00000121873 832 ntBASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col25a1Q99MQ5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm6023-201ENSMUST00000118217 606 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm11340-201ENSMUST00000119226 412 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm10752-201ENSMUST00000218348 729 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col25a1Q99MQ5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Gm44551-201ENSMUST00000208804 171 ntBASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col25a1Q99MQ5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms