Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.18□□□□□ -0.14
Lysmd3Q99LE3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd3Q99LE3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Gm15429-201ENSMUST00000151268 798 ntBASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Gm2495-201ENSMUST00000191160 466 ntBASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd3Q99LE3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd3Q99LE3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms