Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Gm9368-201ENSMUST00000219348 831 ntBASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm27682-201ENSMUST00000183930 110 ntBASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Mir433-201ENSMUST00000093564 124 ntBASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.64□□□□□ -0.23
Cstf1Q99LC2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.64□□□□□ -0.23
Cstf1Q99LC2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm8213-201ENSMUST00000118191 441 ntBASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm12203-201ENSMUST00000118235 598 ntBASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm12209-201ENSMUST00000120089 596 ntBASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cstf1Q99LC2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms