Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdha9Q91Y11 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm12341-201ENSMUST00000119724 503 ntBASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm15823-201ENSMUST00000064305 670 ntBASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha9Q91Y11 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Gm18624-201ENSMUST00000220966 658 ntBASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha9Q91Y11 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms