Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Gm27731-201ENSMUST00000185192 107 ntBASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Gm29741-201ENSMUST00000192667 421 ntBASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb18Q91Y02 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Mir698-201ENSMUST00000102164 109 ntBASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Snora78-201ENSMUST00000158630 128 ntBASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Gm44397-201ENSMUST00000195950 113 ntBASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb18Q91Y02 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb18Q91Y02 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Gm14660-201ENSMUST00000119809 575 ntBASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb18Q91Y02 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Gm8062-201ENSMUST00000139696 444 ntBASIC14.26□□□□□ -0.13
Pcdhb18Q91Y02 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms