Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Gm6916-202ENSMUST00000205523 195 ntBASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Gm15693-201ENSMUST00000120470 637 ntBASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb4Q91XZ6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Gm28630-201ENSMUST00000187806 498 ntBASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Gm37714-201ENSMUST00000194742 342 ntBASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Gm43575-201ENSMUST00000196420 516 ntBASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms