Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb6Q91XZ4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb6Q91XZ4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Gm17330-201ENSMUST00000221047 165 ntBASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Gm24447-201ENSMUST00000083977 338 ntBASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb6Q91XZ4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Gm43094-201ENSMUST00000196549 921 ntBASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb6Q91XZ4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb6Q91XZ4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms