Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc2Q8CG48 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc2Q8CG48 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Gm24420-201ENSMUST00000176676 59 ntBASIC15.67■□□□□ 0.1
Smc2Q8CG48 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.67■□□□□ 0.1
Smc2Q8CG48 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.67■□□□□ 0.1
Smc2Q8CG48 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Gm6912-201ENSMUST00000117218 544 ntBASIC15.66■□□□□ 0.1
Smc2Q8CG48 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc2Q8CG48 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.65■□□□□ 0.1
Smc2Q8CG48 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.65■□□□□ 0.1
Smc2Q8CG48 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc2Q8CG48 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Smc2Q8CG48 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smc2Q8CG48 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.64■□□□□ 0.09
Smc2Q8CG48 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc2Q8CG48 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc2Q8CG48 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc2Q8CG48 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smc2Q8CG48 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms