Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm29310-201ENSMUST00000185468 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21825-201ENSMUST00000185728 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm29109-201ENSMUST00000185895 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21896-201ENSMUST00000186520 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21873-201ENSMUST00000186728 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21794-201ENSMUST00000187056 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21880-201ENSMUST00000187275 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21826-201ENSMUST00000187451 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21198-201ENSMUST00000188393 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21749-201ENSMUST00000189343 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21901-201ENSMUST00000189568 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm29424-201ENSMUST00000189716 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm28599-201ENSMUST00000189838 694 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21867-201ENSMUST00000189917 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm29269-201ENSMUST00000190087 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21722-201ENSMUST00000190153 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm28423-201ENSMUST00000190701 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21899-201ENSMUST00000190745 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21910-201ENSMUST00000191163 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21849-201ENSMUST00000191571 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm28678-201ENSMUST00000191593 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm20910-201ENSMUST00000193268 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm21871-201ENSMUST00000194621 696 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc87Q8CDL9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm8410-201ENSMUST00000117225 605 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm6415-201ENSMUST00000118488 348 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm13015-201ENSMUST00000118674 204 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm29741-201ENSMUST00000192667 421 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 BC001981-202ENSMUST00000191393 1545 ntBASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc87Q8CDL9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccdc87Q8CDL9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms