Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gm2991-201ENSMUST00000173338 480 ntBASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a6Q8C6K9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a6Q8C6K9 Mir877-201ENSMUST00000104738 85 ntBASIC12.28□□□□□ -0.44
Col6a6Q8C6K9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms