Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gm15920-201ENSMUST00000118998 402 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gm13616-201ENSMUST00000120600 222 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gm9824-201ENSMUST00000178707 561 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gm9182-201ENSMUST00000217829 639 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rft1Q8C3B8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Gm25948-201ENSMUST00000175334 112 ntBASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Gm27430-201ENSMUST00000184585 107 ntBASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Gm44333-201ENSMUST00000197168 107 ntBASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rft1Q8C3B8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rft1Q8C3B8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms