Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam43aQ8BUP8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Mir6990-201ENSMUST00000183724 91 ntBASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam43aQ8BUP8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 AC124577.2-201ENSMUST00000217413 2420 ntBASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Gm11543-201ENSMUST00000120758 370 ntBASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Gm43125-201ENSMUST00000201724 730 ntBASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fam43aQ8BUP8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Gm43474-201ENSMUST00000196415 774 ntBASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Gm45098-201ENSMUST00000207179 657 ntBASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam43aQ8BUP8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms