Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Gm14263-201ENSMUST00000117955 746 ntBASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Gm14208-201ENSMUST00000119645 678 ntBASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Gm29787-201ENSMUST00000222129 849 ntBASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col16a1Q8BLX7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col16a1Q8BLX7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col16a1Q8BLX7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col16a1Q8BLX7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Col16a1Q8BLX7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col16a1Q8BLX7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Col16a1Q8BLX7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col16a1Q8BLX7 Gm4760-201ENSMUST00000119663 1030 ntBASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Gm31256-201ENSMUST00000194705 506 ntBASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Gm9004-201ENSMUST00000218739 1222 ntBASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col16a1Q8BLX7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Gm14704-201ENSMUST00000120300 874 ntBASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Gm12566-201ENSMUST00000121479 359 ntBASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Gm44967-201ENSMUST00000207047 631 ntBASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col16a1Q8BLX7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms