Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Gm25287-201ENSMUST00000103846 110 ntBASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Gm22918-201ENSMUST00000103855 110 ntBASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Dupd1-202ENSMUST00000224735 548 ntBASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp2bQ8BJF9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Gm5566-201ENSMUST00000116118 459 ntBASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp2bQ8BJF9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gm44335-201ENSMUST00000196879 141 ntBASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gm44297-201ENSMUST00000198304 141 ntBASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gm44346-201ENSMUST00000198851 141 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms