Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim6Q8BGE7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Trim6Q8BGE7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.51□□□□□ -0.09
Trim6Q8BGE7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim6Q8BGE7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Gm13823-201ENSMUST00000119930 345 ntBASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Gm6222-201ENSMUST00000120787 396 ntBASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 BC001981-202ENSMUST00000191393 1545 ntBASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim6Q8BGE7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms