Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.98□□□□□ -0.01
Col11a1Q61245 Gm8285-201ENSMUST00000208293 759 ntBASIC14.98□□□□□ -0.01
Col11a1Q61245 Gm5904-201ENSMUST00000210286 865 ntBASIC14.98□□□□□ -0.01
Col11a1Q61245 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col11a1Q61245 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Col11a1Q61245 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col11a1Q61245 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col11a1Q61245 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.98□□□□□ -0.01
Col11a1Q61245 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.97□□□□□ -0.01
Col11a1Q61245 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Gm37201-201ENSMUST00000191845 523 ntBASIC14.97□□□□□ -0.01
Col11a1Q61245 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Gm42997-202ENSMUST00000200321 985 ntBASIC14.97□□□□□ -0.01
Col11a1Q61245 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col11a1Q61245 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.97□□□□□ -0.01
Col11a1Q61245 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Daam2-202ENSMUST00000224595 1926 ntBASIC14.97□□□□□ -0.01
Col11a1Q61245 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col11a1Q61245 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Col11a1Q61245 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col11a1Q61245 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col11a1Q61245 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col11a1Q61245 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Gm20426-201ENSMUST00000173657 440 ntBASIC14.96□□□□□ -0.01
Col11a1Q61245 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Gm22058-201ENSMUST00000083393 310 ntBASIC14.96□□□□□ -0.01
Col11a1Q61245 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.96□□□□□ -0.01
Col11a1Q61245 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col11a1Q61245 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col11a1Q61245 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col11a1Q61245 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col11a1Q61245 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col11a1Q61245 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Col11a1Q61245 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col11a1Q61245 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col11a1Q61245 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.95□□□□□ -0.02
Col11a1Q61245 Gm10051-201ENSMUST00000145209 414 ntBASIC14.95□□□□□ -0.02
Col11a1Q61245 Gm23699-201ENSMUST00000158835 135 ntBASIC14.95□□□□□ -0.02
Col11a1Q61245 Gm26361-201ENSMUST00000158868 186 ntBASIC14.95□□□□□ -0.02
Col11a1Q61245 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Gm5051-201ENSMUST00000204085 485 ntBASIC14.95□□□□□ -0.02
Col11a1Q61245 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col11a1Q61245 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col11a1Q61245 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.95□□□□□ -0.02
Col11a1Q61245 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms