Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc27Q3V036 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc27Q3V036 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc27Q3V036 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 BC001981-202ENSMUST00000191393 1545 ntBASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Gm6222-201ENSMUST00000120787 396 ntBASIC17.44■□□□□ 0.38
Ccdc27Q3V036 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Gm9824-201ENSMUST00000178707 561 ntBASIC17.44■□□□□ 0.38
Ccdc27Q3V036 AA619741-201ENSMUST00000195095 646 ntBASIC17.44■□□□□ 0.38
Ccdc27Q3V036 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc27Q3V036 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Gm13823-201ENSMUST00000119930 345 ntBASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc27Q3V036 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Gm43474-201ENSMUST00000196415 774 ntBASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc27Q3V036 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Gm7049-201ENSMUST00000223520 1712 ntBASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 AC125108.1-201ENSMUST00000218986 2330 ntBASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.41■□□□□ 0.38
Ccdc27Q3V036 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc27Q3V036 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms