Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Q3U1D9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.86□□□□□ -0.51
Q3U1D9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.86□□□□□ -0.51
Q3U1D9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.86□□□□□ -0.51
Q3U1D9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Q3U1D9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Q3U1D9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Q3U1D9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Q3U1D9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Q3U1D9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Q3U1D9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Q3U1D9 Gm18473-201ENSMUST00000220543 868 ntBASIC11.85□□□□□ -0.51
Q3U1D9 Gm17330-201ENSMUST00000221047 165 ntBASIC11.85□□□□□ -0.51
Q3U1D9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Q3U1D9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Q3U1D9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Q3U1D9 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.85□□□□□ -0.51
Q3U1D9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Q3U1D9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Q3U1D9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Q3U1D9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Q3U1D9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Q3U1D9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Q3U1D9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.84□□□□□ -0.51
Q3U1D9 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms