Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fndc4Q3TR08 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Gm43575-201ENSMUST00000196420 516 ntBASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Gm44335-201ENSMUST00000196879 141 ntBASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Gm44297-201ENSMUST00000198304 141 ntBASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Gm44346-201ENSMUST00000198851 141 ntBASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fndc4Q3TR08 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm23935-201ENSMUST00000102303 57 ntBASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm24270-201ENSMUST00000102326 57 ntBASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm24245-201ENSMUST00000157318 57 ntBASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gm8584-201ENSMUST00000171982 758 ntBASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fndc4Q3TR08 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fndc4Q3TR08 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms