Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ptchd3Q0EEE2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ptchd3Q0EEE2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.21□□□□□ -0.3
Ptchd3Q0EEE2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ptchd3Q0EEE2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ptchd3Q0EEE2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ptchd3Q0EEE2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Mir6990-201ENSMUST00000183724 91 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Gm27702-201ENSMUST00000184512 56 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Gm44335-201ENSMUST00000196879 141 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Gm44297-201ENSMUST00000198304 141 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Gm44346-201ENSMUST00000198851 141 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.2□□□□□ -0.3
Ptchd3Q0EEE2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Gm43125-201ENSMUST00000201724 730 ntBASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.19□□□□□ -0.3
Ptchd3Q0EEE2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptchd3Q0EEE2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms