Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cntn3Q07409 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cntn3Q07409 Gm15376-201ENSMUST00000122258 783 ntBASIC14.31□□□□□ -0.12
Cntn3Q07409 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.31□□□□□ -0.12
Cntn3Q07409 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
Cntn3Q07409 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.31□□□□□ -0.12
Cntn3Q07409 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.31□□□□□ -0.12
Cntn3Q07409 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.31□□□□□ -0.12
Cntn3Q07409 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.31□□□□□ -0.12
Cntn3Q07409 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn3Q07409 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.31□□□□□ -0.12
Cntn3Q07409 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cntn3Q07409 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.3□□□□□ -0.12
Cntn3Q07409 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cntn3Q07409 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.3□□□□□ -0.12
Cntn3Q07409 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cntn3Q07409 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cntn3Q07409 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.3□□□□□ -0.12
Cntn3Q07409 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.3□□□□□ -0.12
Cntn3Q07409 Gm43433-201ENSMUST00000196573 481 ntBASIC14.3□□□□□ -0.12
Cntn3Q07409 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.3□□□□□ -0.12
Cntn3Q07409 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.3□□□□□ -0.12
Cntn3Q07409 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cntn3Q07409 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cntn3Q07409 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.3□□□□□ -0.12
Cntn3Q07409 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn3Q07409 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.29□□□□□ -0.12
Cntn3Q07409 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.29□□□□□ -0.12
Cntn3Q07409 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cntn3Q07409 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.29□□□□□ -0.12
Cntn3Q07409 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms