Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Gm38223-201ENSMUST00000194484 695 ntBASIC12.6□□□□□ -0.39
Cacna1aP97445 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Gm6082-201ENSMUST00000215204 454 ntBASIC12.6□□□□□ -0.39
Cacna1aP97445 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cacna1aP97445 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cacna1aP97445 Gm5687-201ENSMUST00000118252 640 ntBASIC12.59□□□□□ -0.39
Cacna1aP97445 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm8959-201ENSMUST00000213150 571 ntBASIC12.59□□□□□ -0.39
Cacna1aP97445 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.59□□□□□ -0.39
Cacna1aP97445 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.59□□□□□ -0.39
Cacna1aP97445 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.59□□□□□ -0.39
Cacna1aP97445 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cacna1aP97445 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cacna1aP97445 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.58□□□□□ -0.39
Cacna1aP97445 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.58□□□□□ -0.4
Cacna1aP97445 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.58□□□□□ -0.4
Cacna1aP97445 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Gm24447-201ENSMUST00000083977 338 ntBASIC12.58□□□□□ -0.4
Cacna1aP97445 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cacna1aP97445 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms