Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-3P97334 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Gm9431-201ENSMUST00000119765 1051 ntBASIC17.05■□□□□ 0.32
Nkx2-3P97334 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.05■□□□□ 0.32
Nkx2-3P97334 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-3P97334 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm38341-201ENSMUST00000195357 515 ntBASIC17.04■□□□□ 0.32
Nkx2-3P97334 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm18056-201ENSMUST00000207670 568 ntBASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm18061-201ENSMUST00000208350 562 ntBASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm18063-201ENSMUST00000208529 568 ntBASIC17.04■□□□□ 0.32
Nkx2-3P97334 Gm18052-201ENSMUST00000208750 559 ntBASIC17.04■□□□□ 0.32
Nkx2-3P97334 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-3P97334 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.03■□□□□ 0.32
Nkx2-3P97334 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nkx2-3P97334 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Gm3890-201ENSMUST00000182416 207 ntBASIC17.03■□□□□ 0.32
Nkx2-3P97334 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.03■□□□□ 0.32
Nkx2-3P97334 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.03■□□□□ 0.32
Nkx2-3P97334 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.03■□□□□ 0.32
Nkx2-3P97334 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.03■□□□□ 0.32
Nkx2-3P97334 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-3P97334 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms