Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.14□□□□□ -0.47
Sf3b6P59708 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.14□□□□□ -0.47
Sf3b6P59708 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sf3b6P59708 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.14□□□□□ -0.47
Sf3b6P59708 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Gm25911-201ENSMUST00000157621 56 ntBASIC12.14□□□□□ -0.47
Sf3b6P59708 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Sf3b6P59708 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.14□□□□□ -0.47
Sf3b6P59708 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.13□□□□□ -0.47
Sf3b6P59708 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Mir1895-201ENSMUST00000122615 79 ntBASIC12.13□□□□□ -0.47
Sf3b6P59708 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.13□□□□□ -0.47
Sf3b6P59708 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sf3b6P59708 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.13□□□□□ -0.47
Sf3b6P59708 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b6P59708 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.12□□□□□ -0.47
Sf3b6P59708 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.12□□□□□ -0.47
Sf3b6P59708 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Gm11025-201ENSMUST00000140773 466 ntBASIC12.12□□□□□ -0.47
Sf3b6P59708 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.12□□□□□ -0.47
Sf3b6P59708 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b6P59708 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b6P59708 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms