Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox18P43680 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox18P43680 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sox18P43680 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Sox18P43680 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox18P43680 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox18P43680 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox18P43680 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sox18P43680 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox18P43680 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox18P43680 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.13□□□□□ -0.31
Sox18P43680 Gm13385-201ENSMUST00000121089 220 ntBASIC13.13□□□□□ -0.31
Sox18P43680 Gm10156-201ENSMUST00000122364 462 ntBASIC13.13□□□□□ -0.31
Sox18P43680 Gm4271-201ENSMUST00000174444 973 ntBASIC13.13□□□□□ -0.31
Sox18P43680 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.13□□□□□ -0.31
Sox18P43680 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.13□□□□□ -0.31
Sox18P43680 Gm6334-201ENSMUST00000207083 228 ntBASIC13.13□□□□□ -0.31
Sox18P43680 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.13□□□□□ -0.31
Sox18P43680 Gm5363-201ENSMUST00000211927 938 ntBASIC13.13□□□□□ -0.31
Sox18P43680 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox18P43680 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox18P43680 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox18P43680 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox18P43680 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Gm22323-201ENSMUST00000103832 109 ntBASIC13.12□□□□□ -0.31
Sox18P43680 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox18P43680 Gm12467-201ENSMUST00000117625 745 ntBASIC13.12□□□□□ -0.31
Sox18P43680 Gm12997-201ENSMUST00000120207 640 ntBASIC13.12□□□□□ -0.31
Sox18P43680 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.12□□□□□ -0.31
Sox18P43680 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox18P43680 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Gm6152-201ENSMUST00000151704 340 ntBASIC13.12□□□□□ -0.31
Sox18P43680 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Sox18P43680 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Gm2383-201ENSMUST00000181461 807 ntBASIC13.12□□□□□ -0.31
Sox18P43680 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.12□□□□□ -0.31
Sox18P43680 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.12□□□□□ -0.31
Sox18P43680 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox18P43680 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox18P43680 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox18P43680 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Sox18P43680 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms